marcela.karey's blog

Gramene release 68 is out with new eFP Browsers, 150 plant genomes and a form to submit your gene's function!

The Gramene Knowledgebase Team is pleased to announce its Release #68, featuring 22 new reference plant genomes (including 15 rice cultivars, the IWGSC RefSeq v2.1 version of the bread wheat assembly and two new wheat cultivars, two oat genomes, and the ash tree genome) for a total of 150 plant reference genomes.

Gramene release 67 is out with the new Oryza ClimTools and curated gene expression data and pathways

The Gramene Knowledgebase Team is pleased to announce its Release #67, featuring data updates for CLIMtools, Expression Atlas and Plant Reactome.

Gramene Oryza PanGenome 7.0 is out with a new Oryza CLIMtools portal!

Oryza PanGenome Release 7.0

Released: August 2023

Maize PanGenome R3 - Declaration of intentions

What’s coming in Maize PanGenome Release 3? 

Maize PanGenome is due to be released in March 2023.

Gramene release 66 is out with publications ascribed to curated genes

The Gramene Knowledgebase Team is pleased to announce its Release #66 with 128 reference genomes and 152,102

Gramene Oryza PanGenome 5.0 is released with 30 new synteny maps

Oryza PanGenome Release 5.0

Released: October 2022

 

Image: 

Synteny between Nipponbare chr 1 and Maize B73 v5

Check our Gramene Oryza poster at the 19th International Symposium on Rice Functional Genomics (ISRFG 2022)

Twenty years ago, Oryza sativa became the first rice genome to be sequenced (Goff et al, 2002; Yu et al, 2002), and like so, the foundation of the Gramene database (https://www.gramene.org), a comparative genome mapping database for grasses and a community resource for rice (Ware et al, 2002).

Gramene build 66 - Declaration of intentions

What’s coming in Gramene build 66?

Gramene is due to be released in December 2022. Check out what we are up to. We expect to bring seven new genomes including two new kind of grasses (rye grass and barnyard grass), rye, pea, brown mustard, white fonio, and lemon-scented gum.

 

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