Gramene database build 46 released

Submitted by marcela.karey on Tue, 06/30/2015 - 13:17

The Gramene Team is pleased to announce its release #46. In collaboration with Ensembl Plants we are providing in this release:

  • Updated assembly for tomato to v2.50

  • New variation data from the Wheat HapMap and and updated genotypes from CerealsDB

  • New probe data for barley

  • Updated whole genome alignments for Solanum lycopersicum vs Arabidopsis thaliana, Oryza sativa Japonica, and Vitis vinifera

  • Peptide comparative genomics data across all species

  • Updated cross-references to UniProtKB across all species

  • Updated software, genome browser, database schema and API to Ensembl version 80

  • Updated gene, sequence and variation BioMarts

A complete description of the contents of this new release is available in our release notes.

Please let us know if you have questions or suggestions.

The Gramene Team