Gramene FTP site

In addition to data produced in collaboration with Ensembl Plants (see below), Gramene provides legacy data from the MaizeSequence.Org website, and in-house developed BioCyc pathway databases.

Ensembl Plants FTP server

Data (and file formats) available for the plant reference genomes in Gramene and Ensembl Plants include:

• DNA, cDNA and Protein (FASTA)
• Genomic DNA sequence (EMBL and GenBank flatfile dumps)
• Ensembl core databases and specific features (MySQL and simple text format)
• Species-centered data including comparative genomics annotations (TSV)
• Gene annotations (GTF and GFF3)
• Variation data (GVF and VCF)