Submitted by Sushma_Naithani on Tue, 02/02/2016 - 17:14
Register to join us online on Tuesday, February 16, 2016, at 2:00 pm EST/11:00 am PST.
Plant Reactome is a freely available resource of curated metabolic, signaling, and regulatory pathways from the reference species rice, and gene homology-based pathway projections for 58 other plants including Arabidopsis, maize, grape, strawberry, tomato, etc. Plant Reactome uses a eukaryotic cell model for pathway visualization, and allows uploading and analysis of omics data.
Submitted by Sushma_Naithani on Wed, 01/20/2016 - 19:04
Submitted by marcela.karey on Sun, 01/10/2016 - 12:13
Come meet the Gramene team and get the latest updates to Gramene’s comparative genomics and pathways visualization/mining tools to aid your research of plant models and crops!
The Gramene workshop will give a broad overview of Gramene’s database resources and use cases demonstrating many specific topics like how to:
Submitted by marcela.karey on Tue, 01/05/2016 - 17:05
The Gramene Team is pleased to announce its release #49. In collaboration with Ensembl Plants we are providing in this release:
Submitted by marcela.karey on Thu, 12/10/2015 - 13:55
Data Mining with Gramene!
The Gramene database (http://www.gramene.org) invites you to a FREE 30-min webinar on How to Extract Plant Genomic Data Using BioMart.
The webinar will demonstrate how to explore data for 39 plant reference genomes in the Gramene and Ensembl Plants databases, including sequence, gene structure and annotations such as protein domains and ontology associations, homologs, genetic and structural variations.
Submitted by Sushma_Naithani on Mon, 12/07/2015 - 16:26
In November 2015 Gramene Webinar, Matt Geniza, (a graduate student, Jaiswal Lab at Oregon State University) presented how to use standalone Perl script and command line protocols for Variant Effect Predictor (VEP) analysis. This option is for advanced users who are familiar with the Unix/Linux command line. Also, users are expected to have a SNP DATA file before proceeding for this exercise.
Submitted by pankaj.jaiswal on Thu, 11/19/2015 - 17:44
Submitted by marcela.karey on Fri, 11/13/2015 - 12:37
Click on the link below to view the full schedule for the GARNet/Egenis
workshop on 'Integrating Large Data into Plant Science: From Big Data to
Discovery'.
Detailed schedule as PDF
This will take place in Dartington Hall, Totnes, Devon UK. There are a
limited number of places available for delegates so anyone interested in
attending should contact geraint@garnetcommunity.org.uk with details as
to why this meeting would be beneficial for your research.
Submitted by Sushma_Naithani on Tue, 11/10/2015 - 14:44
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