News

Please join the Gramene Team for their upcoming workshop at the Maize Genetics Conference 2014!

Learn the latest updates to Gramene's comparative genomics and pathways visualization/mining tools to aid your research of plant models and crops.

This workshop will give a broad overview of Gramene's database resources and demonstrate many specific topics like how to:

The Department of Botany and Plant Pathology
(http://bpp.oregonstate.edu/) at Oregon State University (OSU) seeks applicants for a 9-month, full-time
(1.0 FTE), tenure-track faculty position in Plant-Microbe Interactions.
(position link: http://jobs.oregonstate.edu/applicants/Central?quickFind=63597)

ABA regulates a variety of divergent processes in plants from seed development and prevention of viviparity to plants’ response to osmotic stress. The latter is the best known of all the functions attributed to ABA, where ABA causes stomatal closure to reduce transpirational water loss. Since ABA is essential for mediating plants’ response to drought stress, which is crucial for growth and survival under limited water, ABA would have played a pivotal evolutionary role in plants’ ability to colonize land.

Research groups are located at Iowa State University (Ames, IA) and at NCGR (Santa Fe, NM) are looking for a postdoctoral candidate with good computational skills and interest in plant evolutionary biology for a project involving construction and analysis of plant gene families and phylogenies, particularly focusing on the large legume family, and development of a corresponding database and on-line tools for accessing and exploring gene families and associated annotations.

Last Friday, the Gramene website underwent a dramatic facelift. We hope that this has positively impacted your research, but we probably can do a lot more to improve.

Do you find the site easier or more difficult to navigate? Are you missing some functionality? How could we improve?

Please take a few minutes to take this short SURVEY and let us know what you think!

The Gramene Team is pleased to announce its release #40.

You'll notice we have a new look --- You can find all the old stuff at Gramene's Archive

In collaboration with Ensembl Plants we are providing in this release:

1. Updated gene models for Oryza sativa japonica from RAP-DB.
2. Gene models for Triticum aestivum (bread wheat) chromosome survey sequences from MIPS.
3. MaizeCyc updated to version 2.2 including new GO associations.

Please join the Gramene Team for their upcoming workshop at the Plant and Animal Genomes (PAG) 2014 Conference!

Learn the latest updates to Gramene’s comparative genomics and pathways visualization/mining tools to aid your research of plant models and crops.

Workshops will give a broad overview of Gramene’s database resources and demonstrate many specific topics like how to:

This 1/2-day FREE workshop will take place on Wednesday, December 5 of 2013 from 12 – 5 pm at the Hershey Bldg. (West Conference Rm) of the Cold Spring Harbor Laboratory. It will also be broadcasted online, see details below.

It will cover hands-on examples to get you started doing Genome Assembly, Annotation, and RNA-Seq using tools developed by the iPlant Collaborative, a cyberinfrastructure project funded by the National Science Foundation.

Participants will get hands-on experience with the following iPlant cyberinfrastructure:

The Gramene Team is pleased to announce its release #39. In collaboration with Ensembl Plants we are providing in this release:

“Did you know that there are millions of DNA building blocks encoded in the genome of a plant? How can scientists possibly study this vast amount of data? With computers! Come and explore the tools of modern biology used to examine the complexities of DNA. This camp will involve hands-on activities where you will extract genetic material from a plant, assemble DNA sequences, identify genes using computers, examine your plant’s genome with visualization software, and test and look at your results in the laboratory. No programming skills required!”